Finding the unloaded geometry

Finding the unloaded geometryΒΆ

from fenics_plotly import plot
import pulse
geometry = pulse.HeartGeometry.from_file(pulse.mesh_paths["simple_ellipsoid"])
# geometry = pulse.geometries.prolate_ellipsoid_geometry(mesh_size_factor=3.0)
material = pulse.NeoHookean()
# material = pulse.Guccione()
2022-06-15 12:33:50,206 [662] INFO     pulse.geometry_utils: 
Load mesh from h5
# Parameter for the cardiac boundary conditions
bcs_parameters = pulse.MechanicsProblem.default_bcs_parameters()
bcs_parameters["base_spring"] = 1.0
bcs_parameters["base_bc"] = "fix_x"
# Create the problem
problem = pulse.MechanicsProblem(geometry, material, bcs_parameters=bcs_parameters)
# Suppose geometry is loaded with a pressure of 1 kPa
# and create the unloader
unloader = pulse.FixedPointUnloader(problem=problem, pressure=3.0)
2022-06-15 12:33:50,419 [662] INFO     pulse.unloader: 

-------------------------- Unloading options ---------------------------

	Target pressure: 3.0
	maxiter = 10
	tolerance = 0.0001
	regenerate_fibers (serial only)= False

------------------------------------------------------------------------
# Unload the geometry
unloader.unload()
2022-06-15 12:33:50,425 [662] INFO     pulse.unloader: ------------------------------------------------------------------------
2022-06-15 12:33:50,425 [662] INFO     pulse.unloader: ----------------------------Start unloading-----------------------------
2022-06-15 12:33:50,426 [662] INFO     pulse.unloader: ------------------------------------------------------------------------
2022-06-15 12:33:51,364 [662] INFO     pulse.unloader: 
LV Volume of original geometry = 0.749 ml
2022-06-15 12:33:51,388 [662] INFO     pulse.unloader: 
Do an intial solve
2022-06-15 12:35:50,038 [662] INFO     pulse.unloader: 
Iteration: 0
2022-06-15 12:35:56,314 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/quadrature/quadraturerepresentation.py:58: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
  Ignoring precision in integral metadata compiled using quadrature representation. Not implemented.
2022-06-15 12:35:56,376 [662] WARNING  FFC:   Ignoring precision in integral metadata compiled using quadrature representation. Not implemented.
2022-06-15 12:36:04,061 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:36:04,066 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/quadrature/quadraturerepresentation.py:58: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
  Ignoring precision in integral metadata compiled using quadrature representation. Not implemented.
2022-06-15 12:36:04,134 [662] WARNING  FFC:   Ignoring precision in integral metadata compiled using quadrature representation. Not implemented.
2022-06-15 12:36:04,785 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:36:04,857 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:36:04,859 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:36:04,928 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:36:04,931 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:36:04,995 [662] INFO     pulse.unloading_utils: 
LV Volume of original geometry = 0.568 ml
2022-06-15 12:38:05,228 [662] INFO     pulse.unloading_utils: 
LV Volume of inflated geometry = 0.568 ml
2022-06-15 12:38:05,490 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:05,492 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:05,560 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:05,561 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:05,629 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:05,630 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:05,692 [662] INFO     pulse.unloading_utils: 
LV Volume of new reference geometry = 0.717 ml
2022-06-15 12:38:05,710 [662] INFO     pulse.unloader: 
Residual:	0.011328623428538397
2022-06-15 12:38:05,711 [662] INFO     pulse.unloader: 
Iteration: 1
2022-06-15 12:38:05,974 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:05,975 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:06,043 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:06,045 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:06,111 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:06,113 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:06,172 [662] INFO     pulse.unloading_utils: 
LV Volume of original geometry = 0.596 ml
2022-06-15 12:38:11,320 [662] INFO     pulse.unloading_utils: 
LV Volume of inflated geometry = 0.596 ml
2022-06-15 12:38:11,574 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:11,576 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:11,643 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:11,645 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:11,712 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:11,713 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:11,774 [662] INFO     pulse.unloading_utils: 
LV Volume of new reference geometry = 0.754 ml
2022-06-15 12:38:11,793 [662] INFO     pulse.unloader: 
Residual:	0.0016980102145404186
2022-06-15 12:38:11,794 [662] INFO     pulse.unloader: 
Iteration: 2
2022-06-15 12:38:12,058 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:12,059 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:12,127 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:12,129 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:12,194 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:12,196 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:12,257 [662] INFO     pulse.unloading_utils: 
LV Volume of original geometry = 0.592 ml
2022-06-15 12:38:17,365 [662] INFO     pulse.unloading_utils: 
LV Volume of inflated geometry = 0.592 ml
2022-06-15 12:38:17,621 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:17,622 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:17,690 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:17,691 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:17,759 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:17,761 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:17,821 [662] INFO     pulse.unloading_utils: 
LV Volume of new reference geometry = 0.749 ml
2022-06-15 12:38:17,839 [662] INFO     pulse.unloader: 
Residual:	0.00025928769312979117
2022-06-15 12:38:17,840 [662] INFO     pulse.unloader: 
Iteration: 3
2022-06-15 12:38:18,102 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:18,104 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:18,169 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:18,171 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:18,235 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:18,236 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:18,293 [662] INFO     pulse.unloading_utils: 
LV Volume of original geometry = 0.593 ml
2022-06-15 12:38:23,439 [662] INFO     pulse.unloading_utils: 
LV Volume of inflated geometry = 0.593 ml
2022-06-15 12:38:23,701 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:23,703 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:23,774 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:23,776 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:23,845 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:23,846 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:23,909 [662] INFO     pulse.unloading_utils: 
LV Volume of new reference geometry = 0.750 ml
2022-06-15 12:38:23,930 [662] INFO     pulse.unloader: 
Residual:	3.931304295921651e-05
2022-06-15 12:38:23,932 [662] INFO     pulse.unloader: ########################################################################
Unloading suceeding
# Get the unloaded geometry
unloaded_geometry = unloader.unloaded_geometry
2022-06-15 12:38:24,204 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:24,205 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:24,276 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:24,278 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:24,345 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-15 12:38:24,347 [662] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
fig = plot(geometry.mesh, opacity=0.0, show=False)
fig.add_plot(plot(unloaded_geometry.mesh, color="red", show=False))
fig.show()